Pediatric Hepatitis: Comprehensive Differential Diagnosis Guide

1. Infectious Causes
Viral Hepatitis A
  • Key diagnostic points:
  • Positive IgM Anti-HAV
  • History of contaminated food/water exposure
  • Acute onset with prodromal symptoms
  • Peak ALT > AST typically
  • Self-limiting course
Viral Hepatitis B
  • Key diagnostic points:
  • HBsAg positive
  • IgM Anti-HBc for acute infection
  • HBV DNA levels
  • Consider perinatal transmission
  • Risk of chronicity age-dependent (90% in neonates, 5-10% in older children)
Viral Hepatitis C
  • Key diagnostic points:
  • Anti-HCV positive
  • HCV RNA for confirmation
  • Often asymptomatic in children
  • Consider maternal transmission
  • Genotype testing guides treatment
Viral Hepatitis E
  • Key diagnostic points:
  • IgM Anti-HEV
  • Travel history to endemic areas
  • More severe in pregnant adolescents
  • Usually self-limiting
  • PCR for confirmation
Epstein-Barr Virus (EBV)
  • Key diagnostic points:
  • Positive Monospot test
  • EBV VCA IgM
  • Lymphocytosis with atypical lymphocytes
  • Splenomegaly common
  • Associated lymphadenopathy
Cytomegalovirus (CMV)
  • Key diagnostic points:
  • CMV IgM and PCR
  • Consider in immunocompromised
  • Congenital infection pattern
  • Associated thrombocytopenia
  • May see chorioretinitis
Adenovirus
  • Key diagnostic points:
  • PCR detection
  • Associated respiratory/GI symptoms
  • More severe in immunocompromised
  • Often self-limiting in immunocompetent
  • May see conjunctivitis
Herpes Simplex Virus (HSV)
  • Key diagnostic points:
  • PCR for HSV DNA
  • High mortality in neonates
  • Often associated with skin lesions
  • Marked coagulopathy
  • Very high aminotransferases (>1000)
  • Consider in first 30 days of life
Varicella Zoster Virus (VZV)
  • Key diagnostic points:
  • VZV PCR positive
  • Characteristic skin lesions
  • More severe in immunocompromised
  • Elevated transaminases usually mild
  • Consider in post-transplant patients
  • May see concurrent pneumonitis
Parvovirus B19
  • Key diagnostic points:
  • PCR for B19 DNA
  • IgM antibodies
  • Associated aplastic crisis in hemolytic anemias
  • Characteristic "slapped cheek" rash
  • Arthritis may be present
  • Severe in immunocompromised
Enterovirus
  • Key diagnostic points:
  • PCR from stool/CSF
  • Summer/fall seasonality
  • Often associated myocarditis
  • Hand-foot-mouth disease association
  • Severe in neonates
  • CSF pleocytosis common
Human Immunodeficiency Virus (HIV)
  • Key diagnostic points:
  • HIV PCR in infants
  • HIV antibodies in older children
  • CD4 count decrease
  • Consider opportunistic infections
  • May have IRIS after HAART
  • Check maternal status
Toxoplasma gondii
  • Key diagnostic points:
  • IgM and IgG antibodies
  • PCR in congenital cases
  • Consider in immunocompromised
  • Associated chorioretinitis
  • Brain calcifications in congenital
  • May see hydrocephalus
Listeria monocytogenes
  • Key diagnostic points:
  • Blood culture positive
  • Consider in neonates
  • Associated meningitis
  • Maternal fever history
  • Gram-positive rods in CSF
  • May have granulomas on biopsy
Leptospirosis
  • Key diagnostic points:
  • MAT test positive
  • IgM antibodies
  • Exposure history key
  • Conjunctival suffusion
  • Associated renal failure
  • Biphasic illness pattern
Dengue Virus
  • Key diagnostic points:
  • NS1 antigen early
  • IgM/IgG antibodies
  • Travel history to endemic areas
  • Thrombocytopenia marked
  • Warning signs for severe dengue
  • Hepatomegaly common
Yellow Fever Virus
  • Key diagnostic points:
  • PCR in early phase
  • IgM antibodies
  • Travel to endemic areas
  • Vaccination status
  • Jaundice with fever
  • Marked coagulopathy
Crimean-Congo Hemorrhagic Fever
  • Key diagnostic points:
  • PCR detection
  • IgM antibodies
  • Tick exposure history
  • Severe thrombocytopenia
  • DIC common
  • Geographic distribution key
Echovirus
  • Key diagnostic points:
  • PCR from stool/CSF
  • More common in summer
  • Neonates at high risk
  • Associated meningitis
  • May see rash
  • Outbreak history important
2. Autoimmune Causes
Autoimmune Hepatitis Type 1
  • Key diagnostic points:
  • ANA and/or SMA positive
  • Elevated IgG levels
  • Female predominance
  • Associated autoimmune conditions
  • Liver biopsy: interface hepatitis
Autoimmune Hepatitis Type 2
  • Key diagnostic points:
  • Anti-LKM1 and/or Anti-LC1 positive
  • Often younger presentation
  • More severe course than Type 1
  • May have associated autoimmune polyendocrinopathy
  • Higher risk of fulminant presentation
IgG4-Related Hepatobiliary Disease
  • Key diagnostic points:
  • Elevated serum IgG4 (>135 mg/dL)
  • IgG4+ plasma cells on biopsy
  • Storiform fibrosis pattern
  • Often multi-organ involvement
  • Associated autoimmune pancreatitis
  • Biliary strictures common
  • Excellent steroid response
  • Risk of relapse high
Primary Sclerosing Cholangitis-AIH Overlap
  • Key diagnostic points:
  • Elevated transaminases and GGT
  • Positive ANA/ASMA
  • Cholangiographic changes
  • IgG typically elevated
  • Interface hepatitis on biopsy
  • Often IBD association
  • Poor prognosis overall
  • Paris criteria diagnostic
APECED Syndrome
  • Key diagnostic points:
  • AIRE gene mutation
  • Addison's disease
  • Hypoparathyroidism
  • Chronic mucocutaneous candidiasis
  • Anti-liver kidney microsomal type-1
  • Multiple autoimmune manifestations
  • Ectodermal dystrophy
  • Interferon-ω autoantibodies
IPEX Syndrome
  • Key diagnostic points:
  • FOXP3 gene mutation
  • Early-onset diabetes
  • Enteropathy severe
  • Eczematous dermatitis
  • Multiple autoantibodies
  • Reduced T-regulatory cells
  • Male predominance
  • Often fatal without HSCT
3. Metabolic/Genetic Causes
Wilson Disease
  • Key diagnostic points:
  • Low ceruloplasmin
  • Elevated 24-hour urinary copper
  • Kayser-Fleischer rings
  • ATP7B gene mutation
  • AST:ALT ratio > 2.2 suggestive
Alpha-1 Antitrypsin Deficiency
  • Key diagnostic points:
  • Low serum A1AT levels
  • Pi typing (ZZ most severe)
  • Associated lung disease
  • Genetic testing confirms
  • Liver biopsy: PAS-positive globules
Galactosemia
  • Key diagnostic points:
  • Positive newborn screen
  • GALT enzyme activity
  • Elevated galactose-1-phosphate
  • Presents in newborn period
  • E. coli sepsis common
Tyrosinemia Type 1
  • Key diagnostic points:
  • Elevated succinylacetone in urine
  • Elevated alpha-fetoprotein
  • Elevated methionine
  • Rickets may be present
  • Characteristic cabbage-like odor
  • Renal tubular dysfunction
  • High risk of hepatocellular carcinoma
Hereditary Fructose Intolerance
  • Key diagnostic points:
  • Symptoms after fructose exposure
  • Hypoglycemia after fructose
  • ALDOB gene mutation
  • Food aversion characteristic
  • Improvement with fructose elimination
  • Associated proximal tubular dysfunction
  • Liver biopsy: steatosis + fibrosis
Glycogen Storage Disease Type 1
  • Key diagnostic points:
  • Fasting hypoglycemia
  • Lactic acidosis
  • Hepatomegaly from birth
  • "Doll-like" facies
  • Growth failure characteristic
  • Elevated uric acid
  • No ketones during hypoglycemia
Mitochondrial Hepatopathies
  • Key diagnostic points:
  • Elevated lactate/pyruvate ratio
  • Multi-organ involvement
  • Muscle weakness common
  • Developmental delay
  • Respiratory chain enzyme defects
  • MRI brain changes
  • Muscle biopsy: ragged red fibers
Niemann-Pick Disease Type C
  • Key diagnostic points:
  • Vertical supranuclear gaze palsy
  • Filipin staining positive
  • NPC1/NPC2 gene mutation
  • Neonatal cholestasis
  • Progressive neurological deterioration
  • Foam cells in bone marrow
  • Splenomegaly prominent
Alagille Syndrome
  • Key diagnostic points:
  • JAG1/NOTCH2 mutation
  • Bile duct paucity
  • Characteristic facies
  • Butterfly vertebrae
  • Pulmonary stenosis
  • Posterior embryotoxon
  • Growth failure common
  • Variable expressivity
ALGS2 (NOTCH2-related)
  • Key diagnostic points:
  • NOTCH2 mutations
  • Milder phenotype than JAG1
  • Renal involvement common
  • Cardiac defects variable
  • Less typical facies
  • Better prognosis
  • Later onset possible
  • Variable penetrance
MDR3 Deficiency
  • Key diagnostic points:
  • ABCB4 gene mutation
  • High GGT cholestasis
  • Early gallstone disease
  • Maternal history of ICP
  • Progressive liver disease
  • Low phospholipids in bile
  • Variable age of onset
  • Response to UDCA variable
ARC Syndrome
  • Key diagnostic points:
  • VPS33B/VIPAR mutation
  • Arthrogryposis
  • Renal tubular dysfunction
  • Cholestasis
  • Ichthyosis common
  • Platelet alpha-granule defect
  • Severe failure to thrive
  • Poor prognosis
Citrin Deficiency
  • Key diagnostic points:
  • SLC25A13 mutation
  • Citrullinemia type 2
  • Neonatal cholestasis
  • High protein preference
  • Growth failure
  • Fatty liver common
  • Variable presentation
  • Diet modification helps
MEGDEL Syndrome
  • Key diagnostic points:
  • SERAC1 mutation
  • 3-Methylglutaconic aciduria
  • Deafness
  • Encephalopathy
  • Leigh-like syndrome
  • Elevated lactate
  • Progressive course
  • MRI shows basal ganglia changes
Zellweger Syndrome
  • Key diagnostic points:
  • PEX gene mutations
  • Very long chain fatty acids elevated
  • Characteristic facies
  • Hypotonia severe
  • Absent peroxisomes
  • Brain migration defects
  • Retinal abnormalities
  • Early death common
Mevalonate Kinase Deficiency
  • Key diagnostic points:
  • MVK gene mutation
  • Periodic fever syndrome
  • Elevated IgD levels
  • Lymphadenopathy
  • Abdominal pain attacks
  • Elevated urinary mevalonate
  • Rash during attacks
  • Response to IL-1 blockade
DGUOK Deficiency
  • Key diagnostic points:
  • DGUOK gene mutation
  • mtDNA depletion
  • Nystagmus common
  • Hypotonia
  • Progressive liver failure
  • Elevated tyrosine
  • Neurological progression
  • Poor prognosis overall
Citrin Deficiency
  • Key diagnostic points:
  • Elevated citrulline
  • Characteristic food preference
  • Growth failure
  • SLC25A13 gene mutations
  • Higher prevalence in East Asians
  • Fatty liver on imaging
  • Protein aversion typical
  • May present as NICCD in infants
Wolman Disease
  • Key diagnostic points:
  • LIPA enzyme deficiency
  • Adrenal calcifications
  • Severe malabsorption
  • Presentation <6 months
  • Massive hepatosplenomegaly
  • Foam cells in biopsy
  • Failure to thrive marked
  • Very poor prognosis without treatment
Congenital Disorders of Glycosylation
  • Key diagnostic points:
  • Abnormal transferrin isoforms
  • Inverted nipples common
  • Cerebellar involvement
  • Multisystem involvement
  • Failure to thrive
  • Characteristic fat pads
  • Coagulopathy common
  • Genetic testing confirms type
NBAS Deficiency
  • Key diagnostic points:
  • Recurrent acute liver failure
  • Fever triggers episodes
  • Short stature common
  • Ophthalmoplegia may occur
  • Skeletal abnormalities
  • NBAS gene mutation
  • Better prognosis than LARS
  • Prevention of fever important
Gaucher Disease
  • Key diagnostic points:
  • Low glucocerebrosidase
  • Hepatosplenomegaly marked
  • Bone involvement common
  • Chitotriosidase elevated
  • CCL18 elevated
  • Gaucher cells in marrow
  • Type 1 most common
  • Neurological in type 2/3
4. Toxic Causes
Drug-Induced Liver Injury
  • Key diagnostic points:
  • Detailed medication history
  • Temporal relationship to drug
  • R-factor calculation
  • Exclusion of other causes
  • Consider genetic susceptibility
Acetaminophen Toxicity
  • Key diagnostic points:
  • History of ingestion
  • Elevated acetaminophen levels
  • AST > ALT typically
  • Rumack-Matthew nomogram
  • Associated coagulopathy
Isoniazid Hepatotoxicity
  • Key diagnostic points:
  • Usually within 3 months
  • Slow acetylator risk
  • May be asymptomatic
  • ALT >3x ULN significant
  • Risk with other hepatotoxins
  • Requires prompt discontinuation
  • Consider NAC in severe cases
Valproic Acid Hepatotoxicity
  • Key diagnostic points:
  • Higher risk in <2 years
  • Hyperammonemia common
  • Microvesicular steatosis
  • Risk with polytherapy
  • Mitochondrial toxicity
  • Carnitine deficiency may occur
  • Screen for POLG mutations
Mushroom Poisoning (Amanita)
  • Key diagnostic points:
  • Delayed onset >6 hours
  • Early GI symptoms
  • Amatoxin in urine
  • Rapid ALT elevation
  • Three-phase illness
  • Coagulopathy late
  • History of foraging key
  • Family cluster common
Chinese Herb Nephropathy
  • Key diagnostic points:
  • History of herb use
  • Aristolochic acid exposure
  • Progressive renal failure
  • Urothelial atypia
  • DNA adducts present
  • Interstitial fibrosis
  • Cancer risk increased
  • Slow progression typical
Methotrexate Toxicity
  • Key diagnostic points:
  • Cumulative dose effect
  • Risk with renal dysfunction
  • Mucositis common
  • Pancytopenia may occur
  • Folate deficiency risk
  • Elevated methotrexate level
  • Fibrosis on long-term
  • Monitor PDGFR-β levels
Systemic Diseases
Hemophagocytic Lymphohistiocytosis (HLH)
  • Key diagnostic points:
  • Fever >7 days
  • Ferritin >10,000 ng/mL
  • Cytopenias in ≥2 lines
  • Low NK cell activity
  • High soluble CD25
  • Triglycerides >265 mg/dL
  • Hemophagocytes in tissue
Langerhans Cell Histiocytosis
  • Key diagnostic points:
  • CD1a positive cells
  • Sclerosing cholangitis pattern
  • Skin/bone involvement common
  • Diabetes insipidus may occur
  • Characteristic skull lesions
  • S100 protein positive
  • Risk of biliary cirrhosis
Systemic Juvenile Idiopathic Arthritis
  • Key diagnostic points:
  • Quotidian fever pattern
  • Evanescent rash
  • Arthritis
  • Very high ferritin
  • Risk of macrophage activation
  • Elevated IL-18 levels
  • Neutrophilic leukocytosis
Chronic Granulomatous Disease
  • Key diagnostic points:
  • DHR test abnormal
  • Recurrent infections
  • Liver abscesses common
  • Granulomas on biopsy
  • Inflammatory bowel disease-like
  • X-linked or AR inheritance
  • Poor neutrophil oxidative burst
Cystic Fibrosis-Associated Liver Disease
  • Key diagnostic points:
  • CFTR mutation
  • Elevated sweat chloride
  • Focal biliary cirrhosis
  • Multilobular cirrhosis late
  • Portal hypertension common
  • Associated steatosis
  • Usually presents by age 10
DRESS Syndrome
  • Key diagnostic points:
  • Drug reaction with eosinophilia
  • Systemic symptoms
  • Delayed onset 2-6 weeks
  • HHV-6 reactivation common
  • Characteristic rash
  • Lymphadenopathy
  • Multiple organ involvement
  • RegiSCAR criteria diagnostic
GALD (Gestational Alloimmune Liver Disease)
  • Key diagnostic points:
  • Presents in newborn period
  • Very high ferritin
  • C4d positive hepatocytes
  • Extrahepatic siderosis
  • High alpha-fetoprotein
  • Maternal history key
  • MRI shows iron deposition
  • Previous pregnancy losses
PFIC Type 4 (TJP2 Deficiency)
  • Key diagnostic points:
  • Normal GGT cholestasis
  • TJP2 gene mutation
  • Early-onset gallstones
  • Progressive liver failure
  • Severe pruritus
  • High serum bile acids
  • Protein-losing enteropathy
  • HCC risk increased
MARS Deficiency
  • Key diagnostic points:
  • Recurrent ALF episodes
  • Intercrisis recovery
  • MARS gene mutation
  • Growth failure common
  • Developmental delay
  • Hypermethioninemia
  • Brain white matter changes
  • Triggers include infections
Vascular Causes
Budd-Chiari Syndrome
  • Key diagnostic points:
  • Hepatic vein thrombosis on imaging
  • Ascites common
  • Consider underlying thrombophilia
  • Doppler ultrasound diagnostic
  • May see caudate lobe hypertrophy
Veno-Occlusive Disease
  • Key diagnostic points:
  • History of HSCT/chemotherapy
  • Weight gain/ascites
  • Right upper quadrant pain
  • Elevated bilirubin
  • Doppler shows reduced portal flow
Mitochondrial Disorders
POLG-Related Disorders
  • Key diagnostic points:
  • POLG gene mutation
  • Alpers-Huttenlocher syndrome
  • Valproate sensitivity
  • Seizures common
  • Progressive liver failure
  • Developmental regression
  • mtDNA depletion
  • Poor prognosis
MPV17-Related Disease
  • Key diagnostic points:
  • MPV17 gene mutation
  • Hepatocerebral mtDNA depletion
  • Early-onset liver failure
  • Hypoglycemia
  • Growth failure
  • Neurological deterioration
  • Lactic acidosis
  • Variable presentation age
NBAS Deficiency
  • Key diagnostic points:
  • NBAS gene mutation
  • Fever-triggered hepatitis
  • Short stature
  • Skeletal abnormalities
  • Recurrent liver crises
  • Optic atrophy possible
  • Better prognosis than other MDs
  • Fever prevention critical
Other Causes
Neonatal Hemochromatosis
  • Key diagnostic points:
  • Elevated ferritin and transferrin saturation
  • MRI shows iron deposition
  • Presents in newborn period
  • Extrahepatic siderosis
  • Consider gestational alloimmune mechanism
Progressive Familial Intrahepatic Cholestasis
  • Key diagnostic points:
  • Genetic testing (PFIC 1-3)
  • Low/normal GGT in PFIC 1/2
  • High GGT in PFIC 3
  • Severe pruritus
  • Specific bile acid patterns
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